Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rsph3bQ9DA80 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph3bQ9DA80 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rsph3bQ9DA80 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rsph3bQ9DA80 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph3bQ9DA80 Gm43006-201ENSMUST00000197702 1602 ntBASIC21■□□□□ 0.95
Rsph3bQ9DA80 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21■□□□□ 0.95
Rsph3bQ9DA80 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rsph3bQ9DA80 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rsph3bQ9DA80 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rsph3bQ9DA80 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Mir5133-201ENSMUST00000174955 77 ntBASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rsph3bQ9DA80 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rsph3bQ9DA80 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rsph3bQ9DA80 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rsph3bQ9DA80 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.93■□□□□ 0.94
Rsph3bQ9DA80 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 222.3 ms