Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim33Q99PP7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.95■□□□□ 0.62
Trim33Q99PP7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.95■□□□□ 0.62
Trim33Q99PP7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim33Q99PP7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim33Q99PP7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.94■□□□□ 0.62
Trim33Q99PP7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim33Q99PP7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim33Q99PP7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim33Q99PP7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.92■□□□□ 0.62
Trim33Q99PP7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim33Q99PP7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim33Q99PP7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim33Q99PP7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim33Q99PP7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.9■□□□□ 0.62
Trim33Q99PP7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim33Q99PP7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Trim33Q99PP7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim33Q99PP7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim33Q99PP7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 160.6 ms