Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb2Q91Y00 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb2Q91Y00 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb2Q91Y00 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb2Q91Y00 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb2Q91Y00 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb2Q91Y00 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb2Q91Y00 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb2Q91Y00 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb2Q91Y00 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb2Q91Y00 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb2Q91Y00 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Reep4-203ENSMUST00000226563 1444 ntBASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb2Q91Y00 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Gm42569-201ENSMUST00000200539 472 ntBASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdhb2Q91Y00 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb2Q91Y00 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb2Q91Y00 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb2Q91Y00 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb2Q91Y00 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Gm13234-201ENSMUST00000120010 747 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms