Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zswim3Q8CFL8 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zswim3Q8CFL8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 Gm10698-201ENSMUST00000182663 604 ntBASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.15■□□□□ 0.98
Zswim3Q8CFL8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Zswim3Q8CFL8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.14■□□□□ 0.98
Zswim3Q8CFL8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zswim3Q8CFL8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.14■□□□□ 0.97
Zswim3Q8CFL8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zswim3Q8CFL8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zswim3Q8CFL8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zswim3Q8CFL8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Gm7860-201ENSMUST00000121190 879 ntBASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Gm18666-201ENSMUST00000190039 958 ntBASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zswim3Q8CFL8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.1■□□□□ 0.97
Zswim3Q8CFL8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Gm9987-201ENSMUST00000069768 567 ntBASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zswim3Q8CFL8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms