Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Golph3-202ENSMUST00000226517 2359 ntBASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Gm18671-201ENSMUST00000214826 683 ntBASIC22.57■■□□□ 1.2
Alx1Q8C8B0 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 AV356131-201ENSMUST00000206201 750 ntBASIC22.56■■□□□ 1.2
Alx1Q8C8B0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alx1Q8C8B0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alx1Q8C8B0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Notumos-201ENSMUST00000151998 2659 ntBASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Gm13534-201ENSMUST00000121169 513 ntBASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alx1Q8C8B0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Alx1Q8C8B0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Alx1Q8C8B0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Alx1Q8C8B0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Alx1Q8C8B0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Alx1Q8C8B0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Alx1Q8C8B0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Alx1Q8C8B0 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Alx1Q8C8B0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Alx1Q8C8B0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Alx1Q8C8B0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.48■■□□□ 1.19
Alx1Q8C8B0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alx1Q8C8B0 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Gm27405-201ENSMUST00000184201 112 ntBASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Alx1Q8C8B0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms