Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.28■■□□□ 1
Usp6nlQ80XC3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Usp6nlQ80XC3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.27■■□□□ 1
Usp6nlQ80XC3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp6nlQ80XC3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Usp6nlQ80XC3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp6nlQ80XC3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp6nlQ80XC3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Usp6nlQ80XC3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Rab3c-203ENSMUST00000224180 967 ntBASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp6nlQ80XC3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Trmt13-210ENSMUST00000198454 880 ntBASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp6nlQ80XC3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms