Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm43530-201ENSMUST00000195920 274 ntBASIC19.24■□□□□ 0.67
Fen1P39749 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fen1P39749 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fen1P39749 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fen1P39749 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fen1P39749 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Fen1P39749 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Fen1P39749 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fen1P39749 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Fen1P39749 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.23■□□□□ 0.67
Fen1P39749 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fen1P39749 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Fen1P39749 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Fen1P39749 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.22■□□□□ 0.67
Fen1P39749 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Fen1P39749 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Fen1P39749 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Fen1P39749 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.22■□□□□ 0.67
Fen1P39749 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fen1P39749 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Fen1P39749 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Fen1P39749 Etf1-202ENSMUST00000180351 108 ntBASIC19.21■□□□□ 0.67
Fen1P39749 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.21■□□□□ 0.67
Fen1P39749 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.21■□□□□ 0.67
Fen1P39749 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Fen1P39749 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Fen1P39749 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Fen1P39749 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fen1P39749 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Fen1P39749 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fen1P39749 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fen1P39749 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fen1P39749 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fen1P39749 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fen1P39749 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.2■□□□□ 0.66
Fen1P39749 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fen1P39749 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fen1P39749 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Fen1P39749 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Fen1P39749 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.19■□□□□ 0.66
Fen1P39749 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.19■□□□□ 0.66
Fen1P39749 Gm9870-201ENSMUST00000063874 645 ntBASIC19.19■□□□□ 0.66
Fen1P39749 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fen1P39749 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Fen1P39749 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Fen1P39749 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Fen1P39749 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Fen1P39749 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Fen1P39749 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fen1P39749 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fen1P39749 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Fen1P39749 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.17■□□□□ 0.66
Fen1P39749 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.17■□□□□ 0.66
Fen1P39749 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms