Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Gm26524-201ENSMUST00000192339 390 ntBASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Gm22240-201ENSMUST00000175225 82 ntBASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11236J3QMS7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11236J3QMS7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Rab3c-203ENSMUST00000224180 967 ntBASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11236J3QMS7 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm11236J3QMS7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11236J3QMS7 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.16■□□□□ 0.82
Gm11236J3QMS7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm11236J3QMS7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm11236J3QMS7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm11236J3QMS7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm11236J3QMS7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm11236J3QMS7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 201.3 ms