Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc1E9PZP8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Gm42545-201ENSMUST00000202755 922 ntBASIC11.03□□□□□ -0.64
Herc1E9PZP8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Herc1E9PZP8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Herc1E9PZP8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.02□□□□□ -0.65
Herc1E9PZP8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Herc1E9PZP8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.01□□□□□ -0.65
Herc1E9PZP8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc1E9PZP8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc1E9PZP8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Herc1E9PZP8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Herc1E9PZP8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11□□□□□ -0.65
Herc1E9PZP8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC11□□□□□ -0.65
Herc1E9PZP8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Gm17807-201ENSMUST00000186869 298 ntBASIC11□□□□□ -0.65
Herc1E9PZP8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11□□□□□ -0.65
Herc1E9PZP8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc1E9PZP8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc1E9PZP8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC10.99□□□□□ -0.65
Herc1E9PZP8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC10.99□□□□□ -0.65
Herc1E9PZP8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Gm18959-201ENSMUST00000208954 655 ntBASIC10.99□□□□□ -0.65
Herc1E9PZP8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Herc1E9PZP8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Gm44549-201ENSMUST00000208351 577 ntBASIC10.98□□□□□ -0.65
Herc1E9PZP8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Gm34391-201ENSMUST00000203706 907 ntBASIC10.98□□□□□ -0.65
Herc1E9PZP8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Herc1E9PZP8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms