Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Gm20760-201ENSMUST00000179197 648 ntBASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Slc44a4Q91VA1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Slc44a4Q91VA1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Slc44a4Q91VA1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Gm22240-201ENSMUST00000175225 82 ntBASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Slc44a4Q91VA1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Slc44a4Q91VA1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Slc44a4Q91VA1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Slc44a4Q91VA1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Slc44a4Q91VA1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Gm37856-201ENSMUST00000191634 999 ntBASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Slc44a4Q91VA1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Gm26524-201ENSMUST00000192339 390 ntBASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc44a4Q91VA1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Slc44a4Q91VA1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Slc44a4Q91VA1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc44a4Q91VA1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Slc44a4Q91VA1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Slc44a4Q91VA1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.8■■□□□ 1.24
Slc44a4Q91VA1 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms