Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Mmp28Q8CGV8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp28Q8CGV8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp28Q8CGV8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp28Q8CGV8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp28Q8CGV8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp28Q8CGV8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms