Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.27■■□□□ 1
Zswim3Q8CFL8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.27■■□□□ 1
Zswim3Q8CFL8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim3Q8CFL8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim3Q8CFL8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Zswim3Q8CFL8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.26■□□□□ 0.99
Zswim3Q8CFL8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim3Q8CFL8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim3Q8CFL8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim3Q8CFL8 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.23■□□□□ 0.99
Zswim3Q8CFL8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim3Q8CFL8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim3Q8CFL8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim3Q8CFL8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim3Q8CFL8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Gm2559-201ENSMUST00000201323 363 ntBASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim3Q8CFL8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Zswim3Q8CFL8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 Dio3-201ENSMUST00000097228 1449 ntBASIC21.2■□□□□ 0.98
Zswim3Q8CFL8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim3Q8CFL8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Gm37055-201ENSMUST00000191866 133 ntBASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zswim3Q8CFL8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms