Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Alx1Q8C8B0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Alx1Q8C8B0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Alx1Q8C8B0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Alx1Q8C8B0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Alx1Q8C8B0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.68■■□□□ 1.22
Alx1Q8C8B0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Gm13146-201ENSMUST00000118508 780 ntBASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Gm38205-201ENSMUST00000192243 258 ntBASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Alx1Q8C8B0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Alx1Q8C8B0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.66■■□□□ 1.22
Alx1Q8C8B0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Alx1Q8C8B0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Alx1Q8C8B0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Alx1Q8C8B0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.65■■□□□ 1.22
Alx1Q8C8B0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Alx1Q8C8B0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Alx1Q8C8B0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Alx1Q8C8B0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Gm26571-201ENSMUST00000181399 666 ntBASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Gm42778-201ENSMUST00000199644 553 ntBASIC22.63■■□□□ 1.21
Alx1Q8C8B0 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.63■■□□□ 1.21
Alx1Q8C8B0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Alx1Q8C8B0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alx1Q8C8B0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Alx1Q8C8B0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alx1Q8C8B0 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.6■■□□□ 1.21
Alx1Q8C8B0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Alx1Q8C8B0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.59■■□□□ 1.21
Alx1Q8C8B0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Alx1Q8C8B0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Alx1Q8C8B0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Alx1Q8C8B0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Alx1Q8C8B0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Alx1Q8C8B0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Alx1Q8C8B0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Alx1Q8C8B0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Alx1Q8C8B0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Alx1Q8C8B0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.58■■□□□ 1.2
Alx1Q8C8B0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Alx1Q8C8B0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Alx1Q8C8B0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms