Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim4Q8C1Q6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smim4Q8C1Q6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim4Q8C1Q6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim4Q8C1Q6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Golgb1-201ENSMUST00000023534 498 ntBASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim4Q8C1Q6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Smim4Q8C1Q6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Smim4Q8C1Q6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smim4Q8C1Q6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smim4Q8C1Q6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm12922-201ENSMUST00000120626 809 ntBASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim4Q8C1Q6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms