Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.29■□□□□ 0.52
SynbQ8BI41 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.28■□□□□ 0.52
SynbQ8BI41 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.28■□□□□ 0.52
SynbQ8BI41 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SynbQ8BI41 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SynbQ8BI41 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
SynbQ8BI41 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SynbQ8BI41 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynbQ8BI41 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynbQ8BI41 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SynbQ8BI41 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynbQ8BI41 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.27■□□□□ 0.52
SynbQ8BI41 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.27■□□□□ 0.52
SynbQ8BI41 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynbQ8BI41 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynbQ8BI41 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SynbQ8BI41 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SynbQ8BI41 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynbQ8BI41 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SynbQ8BI41 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.26■□□□□ 0.51
SynbQ8BI41 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.26■□□□□ 0.51
SynbQ8BI41 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.26■□□□□ 0.51
SynbQ8BI41 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynbQ8BI41 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.25■□□□□ 0.51
SynbQ8BI41 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.25■□□□□ 0.51
SynbQ8BI41 Gm13234-201ENSMUST00000120010 747 ntBASIC18.25■□□□□ 0.51
SynbQ8BI41 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.25■□□□□ 0.51
SynbQ8BI41 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SynbQ8BI41 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.25■□□□□ 0.51
SynbQ8BI41 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynbQ8BI41 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
SynbQ8BI41 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.24■□□□□ 0.51
SynbQ8BI41 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SynbQ8BI41 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynbQ8BI41 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SynbQ8BI41 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynbQ8BI41 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynbQ8BI41 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynbQ8BI41 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynbQ8BI41 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SynbQ8BI41 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.23■□□□□ 0.51
SynbQ8BI41 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynbQ8BI41 Gm27801-201ENSMUST00000184174 223 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms