Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Gm22238-201ENSMUST00000175222 88 ntBASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43aQ3TL54 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43aQ3TL54 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim43aQ3TL54 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim43aQ3TL54 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Trim43aQ3TL54 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43aQ3TL54 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43aQ3TL54 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Trim43aQ3TL54 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms