Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Thumpd3P97770 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Serp2-204ENSMUST00000228055 705 ntBASIC19.54■□□□□ 0.72
Thumpd3P97770 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.54■□□□□ 0.72
Thumpd3P97770 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd3P97770 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Thumpd3P97770 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Thumpd3P97770 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Thumpd3P97770 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thumpd3P97770 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.52■□□□□ 0.72
Thumpd3P97770 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Thumpd3P97770 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Thumpd3P97770 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thumpd3P97770 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Thumpd3P97770 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Thumpd3P97770 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Thumpd3P97770 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Thumpd3P97770 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Thumpd3P97770 Golph3-205ENSMUST00000228671 2842 ntBASIC19.51■□□□□ 0.71
Thumpd3P97770 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.51■□□□□ 0.71
Thumpd3P97770 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Thumpd3P97770 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Thumpd3P97770 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thumpd3P97770 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Thumpd3P97770 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thumpd3P97770 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thumpd3P97770 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Thumpd3P97770 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.49■□□□□ 0.71
Thumpd3P97770 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.49■□□□□ 0.71
Thumpd3P97770 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thumpd3P97770 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thumpd3P97770 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thumpd3P97770 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thumpd3P97770 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Thumpd3P97770 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Thumpd3P97770 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Thumpd3P97770 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thumpd3P97770 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.47■□□□□ 0.71
Thumpd3P97770 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Thumpd3P97770 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Thumpd3P97770 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms