Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.1■□□□□ 0.81
Hoxd8P23463 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxd8P23463 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.09■□□□□ 0.81
Hoxd8P23463 Gm5408-201ENSMUST00000197998 747 ntBASIC20.09■□□□□ 0.81
Hoxd8P23463 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Hoxd8P23463 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.09■□□□□ 0.81
Hoxd8P23463 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.09■□□□□ 0.81
Hoxd8P23463 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxd8P23463 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxd8P23463 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxd8P23463 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Hoxd8P23463 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxd8P23463 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hoxd8P23463 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxd8P23463 Gm20760-201ENSMUST00000179197 648 ntBASIC20.08■□□□□ 0.81
Hoxd8P23463 Gm26524-201ENSMUST00000192339 390 ntBASIC20.08■□□□□ 0.81
Hoxd8P23463 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.08■□□□□ 0.81
Hoxd8P23463 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hoxd8P23463 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxd8P23463 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxd8P23463 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Hoxd8P23463 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.07■□□□□ 0.8
Hoxd8P23463 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Hoxd8P23463 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxd8P23463 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Hoxd8P23463 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Gm20049-201ENSMUST00000219950 730 ntBASIC20.06■□□□□ 0.8
Hoxd8P23463 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hoxd8P23463 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hoxd8P23463 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.06■□□□□ 0.8
Hoxd8P23463 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxd8P23463 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.05■□□□□ 0.8
Hoxd8P23463 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hoxd8P23463 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.05■□□□□ 0.8
Hoxd8P23463 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.05■□□□□ 0.8
Hoxd8P23463 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxd8P23463 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hoxd8P23463 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hoxd8P23463 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxd8P23463 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.04■□□□□ 0.8
Hoxd8P23463 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hoxd8P23463 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Hoxd8P23463 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxd8P23463 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Hoxd8P23463 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxd8P23463 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxd8P23463 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxd8P23463 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxd8P23463 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxd8P23463 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxd8P23463 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.03■□□□□ 0.8
Hoxd8P23463 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hoxd8P23463 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxd8P23463 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hoxd8P23463 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxd8P23463 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms