Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxb3P09026 Gm5408-201ENSMUST00000197998 747 ntBASIC19.22■□□□□ 0.67
Hoxb3P09026 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.22■□□□□ 0.67
Hoxb3P09026 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxb3P09026 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxb3P09026 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Gm13234-201ENSMUST00000120010 747 ntBASIC19.21■□□□□ 0.67
Hoxb3P09026 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxb3P09026 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hoxb3P09026 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.2■□□□□ 0.66
Hoxb3P09026 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.2■□□□□ 0.66
Hoxb3P09026 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.2■□□□□ 0.66
Hoxb3P09026 Trmt13-210ENSMUST00000198454 880 ntBASIC19.2■□□□□ 0.66
Hoxb3P09026 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxb3P09026 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.2■□□□□ 0.66
Hoxb3P09026 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxb3P09026 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.19■□□□□ 0.66
Hoxb3P09026 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hoxb3P09026 Gm715-201ENSMUST00000117865 831 ntBASIC19.19■□□□□ 0.66
Hoxb3P09026 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.19■□□□□ 0.66
Hoxb3P09026 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Gm10517-202ENSMUST00000192970 758 ntBASIC19.19■□□□□ 0.66
Hoxb3P09026 Gm44487-201ENSMUST00000205145 325 ntBASIC19.19■□□□□ 0.66
Hoxb3P09026 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.19■□□□□ 0.66
Hoxb3P09026 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxb3P09026 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hoxb3P09026 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxb3P09026 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxb3P09026 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxb3P09026 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxb3P09026 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
Hoxb3P09026 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxb3P09026 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb3P09026 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb3P09026 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxb3P09026 Gm7514-201ENSMUST00000209475 934 ntBASIC19.17■□□□□ 0.66
Hoxb3P09026 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.17■□□□□ 0.66
Hoxb3P09026 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hoxb3P09026 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Hoxb3P09026 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb3P09026 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb3P09026 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb3P09026 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb3P09026 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hoxb3P09026 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Hoxb3P09026 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Hoxb3P09026 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxb3P09026 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Hoxb3P09026 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.15■□□□□ 0.66
Hoxb3P09026 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxb3P09026 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxb3P09026 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.15■□□□□ 0.66
Hoxb3P09026 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxb3P09026 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxb3P09026 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxb3P09026 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxb3P09026 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.14■□□□□ 0.65
Hoxb3P09026 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.14■□□□□ 0.65
Hoxb3P09026 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.14■□□□□ 0.65
Hoxb3P09026 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.14■□□□□ 0.65
Hoxb3P09026 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxb3P09026 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms