Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Dnmt3aO88508 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dnmt3aO88508 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Dnmt3aO88508 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Dnmt3aO88508 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dnmt3aO88508 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dnmt3aO88508 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.32■□□□□ 0.68
Dnmt3aO88508 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dnmt3aO88508 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dnmt3aO88508 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dnmt3aO88508 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dnmt3aO88508 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dnmt3aO88508 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dnmt3aO88508 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.3■□□□□ 0.68
Dnmt3aO88508 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dnmt3aO88508 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.29■□□□□ 0.68
Dnmt3aO88508 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dnmt3aO88508 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.29■□□□□ 0.68
Dnmt3aO88508 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.28■□□□□ 0.68
Dnmt3aO88508 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3aO88508 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Dnmt3aO88508 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Dnmt3aO88508 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.27■□□□□ 0.67
Dnmt3aO88508 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3aO88508 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3aO88508 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms