Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.78■□□□□ 0.44
Hps1O08983 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hps1O08983 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Hps1O08983 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hps1O08983 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hps1O08983 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hps1O08983 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hps1O08983 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.77■□□□□ 0.44
Hps1O08983 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Hps1O08983 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hps1O08983 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hps1O08983 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hps1O08983 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.76■□□□□ 0.43
Hps1O08983 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.76■□□□□ 0.43
Hps1O08983 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hps1O08983 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hps1O08983 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hps1O08983 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.75■□□□□ 0.43
Hps1O08983 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
Hps1O08983 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hps1O08983 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hps1O08983 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.74■□□□□ 0.43
Hps1O08983 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.74■□□□□ 0.43
Hps1O08983 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hps1O08983 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Hps1O08983 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hps1O08983 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hps1O08983 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hps1O08983 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hps1O08983 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Hps1O08983 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.73■□□□□ 0.43
Hps1O08983 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hps1O08983 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hps1O08983 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.72■□□□□ 0.43
Hps1O08983 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hps1O08983 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.72■□□□□ 0.43
Hps1O08983 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hps1O08983 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hps1O08983 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hps1O08983 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.72■□□□□ 0.43
Hps1O08983 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hps1O08983 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hps1O08983 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Hps1O08983 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hps1O08983 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hps1O08983 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hps1O08983 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms