Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11236J3QMS7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11236J3QMS7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11236J3QMS7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11236J3QMS7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.31■□□□□ 0.84
Gm11236J3QMS7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.31■□□□□ 0.84
Gm11236J3QMS7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.31■□□□□ 0.84
Gm11236J3QMS7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11236J3QMS7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11236J3QMS7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11236J3QMS7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm11236J3QMS7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Gm20049-201ENSMUST00000219950 730 ntBASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gm11236J3QMS7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm11236J3QMS7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11236J3QMS7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Gm8520-201ENSMUST00000186517 868 ntBASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11236J3QMS7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11236J3QMS7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms