Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-3A0A075B6B3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Trav6d-3A0A075B6B3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-3A0A075B6B3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-3A0A075B6B3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Golph3-205ENSMUST00000228671 2842 ntBASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-3A0A075B6B3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-3A0A075B6B3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6d-3A0A075B6B3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-3A0A075B6B3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav6d-3A0A075B6B3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms