Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.25■□□□□ 0.35
Cldn13Q9Z0S4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn13Q9Z0S4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn13Q9Z0S4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn13Q9Z0S4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn13Q9Z0S4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cldn13Q9Z0S4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.21■□□□□ 0.34
Cldn13Q9Z0S4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn13Q9Z0S4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldn13Q9Z0S4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms