Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Gm15565-201ENSMUST00000118890 427 ntBASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-4Q9EQM3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-4Q9EQM3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-4Q9EQM3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.98■□□□□ 0.79
Nkx2-4Q9EQM3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-4Q9EQM3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Nkx2-4Q9EQM3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Nkx2-4Q9EQM3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nkx2-4Q9EQM3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-4Q9EQM3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms