Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Necab3Q9D6J4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Necab3Q9D6J4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Necab3Q9D6J4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Necab3Q9D6J4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Necab3Q9D6J4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Necab3Q9D6J4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Necab3Q9D6J4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Gm6365-201ENSMUST00000054711 744 ntBASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Necab3Q9D6J4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Necab3Q9D6J4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Necab3Q9D6J4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Necab3Q9D6J4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.64■□□□□ 0.74
Necab3Q9D6J4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Necab3Q9D6J4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Necab3Q9D6J4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms