Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smg8Q8VE18 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smg8Q8VE18 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Smg8Q8VE18 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.74■□□□□ 0.91
Smg8Q8VE18 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Gm12933-201ENSMUST00000120203 872 ntBASIC20.73■□□□□ 0.91
Smg8Q8VE18 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.73■□□□□ 0.91
Smg8Q8VE18 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smg8Q8VE18 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smg8Q8VE18 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smg8Q8VE18 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smg8Q8VE18 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Gm10602-201ENSMUST00000098239 609 ntBASIC20.71■□□□□ 0.91
Smg8Q8VE18 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smg8Q8VE18 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Smg8Q8VE18 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.7■□□□□ 0.9
Smg8Q8VE18 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.7■□□□□ 0.9
Smg8Q8VE18 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg8Q8VE18 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.7■□□□□ 0.9
Smg8Q8VE18 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg8Q8VE18 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smg8Q8VE18 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.68■□□□□ 0.9
Smg8Q8VE18 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smg8Q8VE18 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.67■□□□□ 0.9
Smg8Q8VE18 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smg8Q8VE18 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.66■□□□□ 0.9
Smg8Q8VE18 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg8Q8VE18 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smg8Q8VE18 Gm13534-201ENSMUST00000121169 513 ntBASIC20.65■□□□□ 0.9
Smg8Q8VE18 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.65■□□□□ 0.9
Smg8Q8VE18 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smg8Q8VE18 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smg8Q8VE18 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.64■□□□□ 0.9
Smg8Q8VE18 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smg8Q8VE18 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smg8Q8VE18 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smg8Q8VE18 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smg8Q8VE18 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Smg8Q8VE18 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.64■□□□□ 0.89
Smg8Q8VE18 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smg8Q8VE18 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms