Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cd109Q8R422 Gm3807-201ENSMUST00000193520 1168 ntBASIC27.77■■■□□ 2.04
Cd109Q8R422 Gm5408-201ENSMUST00000197998 747 ntBASIC27.77■■■□□ 2.04
Cd109Q8R422 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC27.77■■■□□ 2.04
Cd109Q8R422 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cd109Q8R422 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Cd109Q8R422 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cd109Q8R422 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC27.77■■■□□ 2.04
Cd109Q8R422 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cd109Q8R422 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC27.76■■■□□ 2.04
Cd109Q8R422 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Cd109Q8R422 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Cd109Q8R422 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
Cd109Q8R422 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Gm26524-201ENSMUST00000192339 390 ntBASIC27.75■■■□□ 2.03
Cd109Q8R422 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC27.75■■■□□ 2.03
Cd109Q8R422 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Cd109Q8R422 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC27.75■■■□□ 2.03
Cd109Q8R422 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC27.75■■■□□ 2.03
Cd109Q8R422 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cd109Q8R422 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Cd109Q8R422 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Cd109Q8R422 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC27.74■■■□□ 2.03
Cd109Q8R422 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Cd109Q8R422 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cd109Q8R422 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
Cd109Q8R422 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC27.73■■■□□ 2.03
Cd109Q8R422 Gm27032-201ENSMUST00000183124 1116 ntBASIC27.73■■■□□ 2.03
Cd109Q8R422 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cd109Q8R422 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cd109Q8R422 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cd109Q8R422 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Cd109Q8R422 AC122769.4-201ENSMUST00000228166 901 ntBASIC27.72■■■□□ 2.03
Cd109Q8R422 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Cd109Q8R422 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Cd109Q8R422 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Cd109Q8R422 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC27.71■■■□□ 2.03
Cd109Q8R422 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Cd109Q8R422 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Cd109Q8R422 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cd109Q8R422 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cd109Q8R422 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cd109Q8R422 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cd109Q8R422 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cd109Q8R422 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cd109Q8R422 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cd109Q8R422 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cd109Q8R422 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cd109Q8R422 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cd109Q8R422 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cd109Q8R422 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cd109Q8R422 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Cd109Q8R422 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Cd109Q8R422 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC27.69■■■□□ 2.02
Cd109Q8R422 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC27.69■■■□□ 2.02
Cd109Q8R422 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cd109Q8R422 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Cd109Q8R422 Gm20100-201ENSMUST00000209418 2272 ntBASIC27.68■■■□□ 2.02
Cd109Q8R422 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Cd109Q8R422 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cd109Q8R422 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cd109Q8R422 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC27.68■■■□□ 2.02
Cd109Q8R422 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cd109Q8R422 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Cd109Q8R422 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Cd109Q8R422 AC131586.2-201ENSMUST00000228370 1512 ntBASIC27.67■■■□□ 2.02
Cd109Q8R422 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Cd109Q8R422 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC27.67■■■□□ 2.02
Cd109Q8R422 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Cd109Q8R422 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Cd109Q8R422 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Cd109Q8R422 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms