Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim4Q8C1Q6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smim4Q8C1Q6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Gm45102-201ENSMUST00000207427 857 ntBASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim4Q8C1Q6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim4Q8C1Q6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim4Q8C1Q6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim4Q8C1Q6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Gm14117-201ENSMUST00000122417 843 ntBASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smim4Q8C1Q6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim4Q8C1Q6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim4Q8C1Q6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms