Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Gm22240-201ENSMUST00000175225 82 ntBASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Gm5408-201ENSMUST00000197998 747 ntBASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Usp6nlQ80XC3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Usp6nlQ80XC3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Usp6nlQ80XC3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Gm6211-202ENSMUST00000167849 925 ntBASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Usp6nlQ80XC3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Usp6nlQ80XC3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Gm20049-201ENSMUST00000219950 730 ntBASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Usp6nlQ80XC3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Usp6nlQ80XC3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Usp6nlQ80XC3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.42■■□□□ 1.02
Usp6nlQ80XC3 Gm8520-201ENSMUST00000186517 868 ntBASIC21.42■■□□□ 1.02
Usp6nlQ80XC3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Usp6nlQ80XC3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp6nlQ80XC3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp6nlQ80XC3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Usp6nlQ80XC3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Usp6nlQ80XC3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Usp6nlQ80XC3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Usp6nlQ80XC3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp6nlQ80XC3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp6nlQ80XC3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms