Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Rpap1Q80TE0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Rpap1Q80TE0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Rab3c-203ENSMUST00000224180 967 ntBASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rpap1Q80TE0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC30.45■■■□□ 2.47
Rpap1Q80TE0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Rpap1Q80TE0 Gm7860-201ENSMUST00000121190 879 ntBASIC30.44■■■□□ 2.46
Rpap1Q80TE0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rpap1Q80TE0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Rpap1Q80TE0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpap1Q80TE0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rpap1Q80TE0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rpap1Q80TE0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rpap1Q80TE0 Gm37563-201ENSMUST00000192580 1513 ntBASIC30.4■■■□□ 2.46
Rpap1Q80TE0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Rpap1Q80TE0 Gm7977-201ENSMUST00000193787 748 ntBASIC30.39■■■□□ 2.46
Rpap1Q80TE0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rpap1Q80TE0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Rpap1Q80TE0 Gm27032-201ENSMUST00000183124 1116 ntBASIC30.39■■■□□ 2.45
Rpap1Q80TE0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC30.39■■■□□ 2.45
Rpap1Q80TE0 AC135963.1-201ENSMUST00000211640 717 ntBASIC30.39■■■□□ 2.45
Rpap1Q80TE0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Rpap1Q80TE0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rpap1Q80TE0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rpap1Q80TE0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Rpap1Q80TE0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rpap1Q80TE0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpap1Q80TE0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC30.36■■■□□ 2.45
Rpap1Q80TE0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Rpap1Q80TE0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Rpap1Q80TE0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC30.35■■■□□ 2.45
Rpap1Q80TE0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rpap1Q80TE0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Rpap1Q80TE0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rpap1Q80TE0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Rpap1Q80TE0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rpap1Q80TE0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.45
Rpap1Q80TE0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
Rpap1Q80TE0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rpap1Q80TE0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC30.32■■■□□ 2.44
Rpap1Q80TE0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rpap1Q80TE0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rpap1Q80TE0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rpap1Q80TE0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms