Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube3Q66PY1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Gm18284-201ENSMUST00000172604 624 ntBASIC20.35■□□□□ 0.85
Scube3Q66PY1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.35■□□□□ 0.85
Scube3Q66PY1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube3Q66PY1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.34■□□□□ 0.85
Scube3Q66PY1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Scube3Q66PY1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.33■□□□□ 0.85
Scube3Q66PY1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube3Q66PY1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.33■□□□□ 0.85
Scube3Q66PY1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube3Q66PY1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Scube3Q66PY1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube3Q66PY1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Scube3Q66PY1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scube3Q66PY1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.31■□□□□ 0.84
Scube3Q66PY1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube3Q66PY1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube3Q66PY1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube3Q66PY1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Scube3Q66PY1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube3Q66PY1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.3■□□□□ 0.84
Scube3Q66PY1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube3Q66PY1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scube3Q66PY1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.29■□□□□ 0.84
Scube3Q66PY1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube3Q66PY1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scube3Q66PY1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms