Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VcanQ62059 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VcanQ62059 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.48■□□□□ 0.55
VcanQ62059 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.48■□□□□ 0.55
VcanQ62059 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.48■□□□□ 0.55
VcanQ62059 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VcanQ62059 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VcanQ62059 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.48■□□□□ 0.55
VcanQ62059 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.48■□□□□ 0.55
VcanQ62059 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VcanQ62059 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VcanQ62059 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VcanQ62059 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Gm12896-201ENSMUST00000118430 226 ntBASIC18.47■□□□□ 0.55
VcanQ62059 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VcanQ62059 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VcanQ62059 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.47■□□□□ 0.55
VcanQ62059 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VcanQ62059 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.46■□□□□ 0.55
VcanQ62059 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Mir1199-201ENSMUST00000117015 119 ntBASIC18.46■□□□□ 0.55
VcanQ62059 Gm6659-201ENSMUST00000174752 547 ntBASIC18.46■□□□□ 0.55
VcanQ62059 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VcanQ62059 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VcanQ62059 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VcanQ62059 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.46■□□□□ 0.55
VcanQ62059 Gm13534-201ENSMUST00000121169 513 ntBASIC18.46■□□□□ 0.55
VcanQ62059 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VcanQ62059 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
VcanQ62059 Gm43799-201ENSMUST00000201845 579 ntBASIC18.45■□□□□ 0.54
VcanQ62059 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VcanQ62059 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.45■□□□□ 0.54
VcanQ62059 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VcanQ62059 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VcanQ62059 Mir5122-201ENSMUST00000175004 89 ntBASIC18.44■□□□□ 0.54
VcanQ62059 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.44■□□□□ 0.54
VcanQ62059 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VcanQ62059 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VcanQ62059 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VcanQ62059 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.44■□□□□ 0.54
VcanQ62059 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VcanQ62059 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VcanQ62059 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VcanQ62059 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VcanQ62059 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.43■□□□□ 0.54
VcanQ62059 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VcanQ62059 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.42■□□□□ 0.54
VcanQ62059 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VcanQ62059 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VcanQ62059 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Gm10698-201ENSMUST00000182663 604 ntBASIC18.41■□□□□ 0.54
VcanQ62059 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VcanQ62059 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.41■□□□□ 0.54
VcanQ62059 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VcanQ62059 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VcanQ62059 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.4■□□□□ 0.54
VcanQ62059 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VcanQ62059 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
VcanQ62059 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.39■□□□□ 0.54
VcanQ62059 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms