Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cacna1aP97445 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.91■□□□□ 0.46
Cacna1aP97445 Trmt13-210ENSMUST00000198454 880 ntBASIC17.91■□□□□ 0.46
Cacna1aP97445 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.91■□□□□ 0.46
Cacna1aP97445 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cacna1aP97445 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Cacna1aP97445 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1aP97445 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1aP97445 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Cacna1aP97445 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.9■□□□□ 0.46
Cacna1aP97445 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1aP97445 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Cacna1aP97445 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.89■□□□□ 0.45
Cacna1aP97445 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cacna1aP97445 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cacna1aP97445 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1aP97445 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cacna1aP97445 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.88■□□□□ 0.45
Cacna1aP97445 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1aP97445 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cacna1aP97445 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.88■□□□□ 0.45
Cacna1aP97445 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.88■□□□□ 0.45
Cacna1aP97445 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1aP97445 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cacna1aP97445 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cacna1aP97445 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cacna1aP97445 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.87■□□□□ 0.45
Cacna1aP97445 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.87■□□□□ 0.45
Cacna1aP97445 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cacna1aP97445 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1aP97445 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.86■□□□□ 0.45
Cacna1aP97445 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1aP97445 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.86■□□□□ 0.45
Cacna1aP97445 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1aP97445 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cacna1aP97445 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1aP97445 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1aP97445 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 193.2 ms