Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RetP35546 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RetP35546 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RetP35546 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RetP35546 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RetP35546 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RetP35546 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Iqck-206ENSMUST00000208658 2891 ntBASIC18.12■□□□□ 0.49
RetP35546 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Gm40848-201ENSMUST00000221998 324 ntBASIC18.12■□□□□ 0.49
RetP35546 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RetP35546 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RetP35546 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.11■□□□□ 0.49
RetP35546 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.11■□□□□ 0.49
RetP35546 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RetP35546 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RetP35546 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RetP35546 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RetP35546 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RetP35546 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.1■□□□□ 0.49
RetP35546 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.1■□□□□ 0.49
RetP35546 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RetP35546 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RetP35546 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RetP35546 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.09■□□□□ 0.49
RetP35546 Gm18671-201ENSMUST00000214826 683 ntBASIC18.09■□□□□ 0.49
RetP35546 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RetP35546 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.08■□□□□ 0.49
RetP35546 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RetP35546 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RetP35546 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RetP35546 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RetP35546 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RetP35546 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.08■□□□□ 0.48
RetP35546 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RetP35546 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.07■□□□□ 0.48
RetP35546 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.07■□□□□ 0.48
RetP35546 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.07■□□□□ 0.48
RetP35546 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RetP35546 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
RetP35546 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.07■□□□□ 0.48
RetP35546 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RetP35546 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RetP35546 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RetP35546 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RetP35546 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RetP35546 Gm27011-201ENSMUST00000182352 972 ntBASIC18.06■□□□□ 0.48
RetP35546 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.06■□□□□ 0.48
RetP35546 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RetP35546 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RetP35546 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RetP35546 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RetP35546 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.05■□□□□ 0.48
RetP35546 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.05■□□□□ 0.48
RetP35546 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.05■□□□□ 0.48
RetP35546 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RetP35546 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RetP35546 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RetP35546 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RetP35546 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms