Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rom1P32958 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Rom1P32958 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rom1P32958 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.32■□□□□ 0.04
Rom1P32958 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rom1P32958 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rom1P32958 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rom1P32958 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.31■□□□□ 0.04
Rom1P32958 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rom1P32958 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rom1P32958 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Rom1P32958 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rom1P32958 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.3■□□□□ 0.04
Rom1P32958 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.3■□□□□ 0.04
Rom1P32958 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rom1P32958 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.3■□□□□ 0.04
Rom1P32958 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rom1P32958 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rom1P32958 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rom1P32958 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.29■□□□□ 0.04
Rom1P32958 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.29■□□□□ 0.04
Rom1P32958 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rom1P32958 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rom1P32958 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rom1P32958 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rom1P32958 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rom1P32958 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.28■□□□□ 0.04
Rom1P32958 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.28■□□□□ 0.04
Rom1P32958 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.28■□□□□ 0.04
Rom1P32958 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Rom1P32958 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rom1P32958 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.27■□□□□ 0.04
Rom1P32958 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
Rom1P32958 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rom1P32958 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rom1P32958 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.27■□□□□ 0.04
Rom1P32958 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rom1P32958 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Rom1P32958 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms