Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3aO88508 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3aO88508 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3aO88508 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.39■□□□□ 0.7
Dnmt3aO88508 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3aO88508 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Gm11421-201ENSMUST00000122124 294 ntBASIC19.39■□□□□ 0.69
Dnmt3aO88508 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.39■□□□□ 0.69
Dnmt3aO88508 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3aO88508 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Gm40848-201ENSMUST00000221998 324 ntBASIC19.38■□□□□ 0.69
Dnmt3aO88508 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Dnmt3aO88508 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 AA386476-201ENSMUST00000098781 1665 ntBASIC19.38■□□□□ 0.69
Dnmt3aO88508 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3aO88508 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dnmt3aO88508 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Dnmt3aO88508 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Dnmt3aO88508 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.34■□□□□ 0.69
Dnmt3aO88508 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Gm43060-201ENSMUST00000200621 289 ntBASIC19.34■□□□□ 0.69
Dnmt3aO88508 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.34■□□□□ 0.69
Dnmt3aO88508 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dnmt3aO88508 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Dnmt3aO88508 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms