Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.47■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv5-39A0A0G2JDV4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm12933-201ENSMUST00000120203 872 ntBASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv5-39A0A0G2JDV4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.41■□□□□ 0.7
Igkv5-39A0A0G2JDV4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms