Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav10A0A075B642 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Gm45417-201ENSMUST00000209533 758 ntBASIC17.17■□□□□ 0.34
Trav10A0A075B642 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav10A0A075B642 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav10A0A075B642 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.16■□□□□ 0.34
Trav10A0A075B642 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.16■□□□□ 0.34
Trav10A0A075B642 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav10A0A075B642 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav10A0A075B642 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Trav10A0A075B642 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.14■□□□□ 0.33
Trav10A0A075B642 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.14■□□□□ 0.33
Trav10A0A075B642 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Iqck-206ENSMUST00000208658 2891 ntBASIC17.14■□□□□ 0.33
Trav10A0A075B642 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav10A0A075B642 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Gm8493-201ENSMUST00000196881 489 ntBASIC17.13■□□□□ 0.33
Trav10A0A075B642 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.13■□□□□ 0.33
Trav10A0A075B642 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.13■□□□□ 0.33
Trav10A0A075B642 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav10A0A075B642 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Serp2-204ENSMUST00000228055 705 ntBASIC17.12■□□□□ 0.33
Trav10A0A075B642 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav10A0A075B642 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav10A0A075B642 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.11■□□□□ 0.33
Trav10A0A075B642 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav10A0A075B642 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav10A0A075B642 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.11■□□□□ 0.33
Trav10A0A075B642 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10A0A075B642 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10A0A075B642 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10A0A075B642 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav10A0A075B642 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10A0A075B642 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms