Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Gm13168-201ENSMUST00000121771 632 ntBASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Gm20049-201ENSMUST00000219950 730 ntBASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav8n-2A0A075B633 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8n-2A0A075B633 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8n-2A0A075B633 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.77■□□□□ 0.44
Trav8n-2A0A075B633 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trav8n-2A0A075B633 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trav8n-2A0A075B633 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8n-2A0A075B633 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav8n-2A0A075B633 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.75■□□□□ 0.43
Trav8n-2A0A075B633 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Gm10812-201ENSMUST00000099864 546 ntBASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8n-2A0A075B633 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms