Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2afb1S4R1E0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb1S4R1E0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb1S4R1E0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
H2afb1S4R1E0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.53■□□□□ 0.4
H2afb1S4R1E0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb1S4R1E0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb1S4R1E0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
H2afb1S4R1E0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
H2afb1S4R1E0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb1S4R1E0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
H2afb1S4R1E0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb1S4R1E0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb1S4R1E0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms