Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20aQ9DC33 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20aQ9DC33 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20aQ9DC33 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Gm11175-201ENSMUST00000116172 543 ntBASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20aQ9DC33 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hmg20aQ9DC33 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmg20aQ9DC33 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hmg20aQ9DC33 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Gm14523-201ENSMUST00000117260 558 ntBASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmg20aQ9DC33 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms