Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mbd3l1Q9D9H3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Mbd3l1Q9D9H3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Gm8109-201ENSMUST00000194076 746 ntBASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mbd3l1Q9D9H3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Mbd3l1Q9D9H3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mbd3l1Q9D9H3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Mbd3l1Q9D9H3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Gm4799-201ENSMUST00000095396 657 ntBASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.83■□□□□ 0.28
Mbd3l1Q9D9H3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mbd3l1Q9D9H3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms