Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raf1Q99N57 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Raf1Q99N57 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Raf1Q99N57 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raf1Q99N57 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.33■□□□□ 0.37
Raf1Q99N57 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raf1Q99N57 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raf1Q99N57 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raf1Q99N57 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.33■□□□□ 0.37
Raf1Q99N57 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raf1Q99N57 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Raf1Q99N57 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Raf1Q99N57 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.33■□□□□ 0.36
Raf1Q99N57 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Raf1Q99N57 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Raf1Q99N57 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raf1Q99N57 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Raf1Q99N57 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.32■□□□□ 0.36
Raf1Q99N57 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
Raf1Q99N57 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Raf1Q99N57 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raf1Q99N57 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Raf1Q99N57 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.31■□□□□ 0.36
Raf1Q99N57 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Raf1Q99N57 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raf1Q99N57 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Raf1Q99N57 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.3■□□□□ 0.36
Raf1Q99N57 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.3■□□□□ 0.36
Raf1Q99N57 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.3■□□□□ 0.36
Raf1Q99N57 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.3■□□□□ 0.36
Raf1Q99N57 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.3■□□□□ 0.36
Raf1Q99N57 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.3■□□□□ 0.36
Raf1Q99N57 Golgb1-201ENSMUST00000023534 498 ntBASIC17.3■□□□□ 0.36
Raf1Q99N57 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raf1Q99N57 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Raf1Q99N57 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Raf1Q99N57 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Raf1Q99N57 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raf1Q99N57 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.28■□□□□ 0.36
Raf1Q99N57 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.28■□□□□ 0.36
Raf1Q99N57 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.28■□□□□ 0.36
Raf1Q99N57 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raf1Q99N57 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Mir6236-201ENSMUST00000184437 123 ntBASIC17.27■□□□□ 0.36
Raf1Q99N57 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Raf1Q99N57 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms