Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col20a1Q923P0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col20a1Q923P0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.08■■□□□ 1.28
Col20a1Q923P0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
Col20a1Q923P0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.07■■□□□ 1.28
Col20a1Q923P0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Gm13146-201ENSMUST00000118508 780 ntBASIC23.07■■□□□ 1.28
Col20a1Q923P0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Gm7514-201ENSMUST00000209475 934 ntBASIC23.07■■□□□ 1.28
Col20a1Q923P0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col20a1Q923P0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Col20a1Q923P0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.05■■□□□ 1.28
Col20a1Q923P0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col20a1Q923P0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Gm38205-201ENSMUST00000192243 258 ntBASIC23.04■■□□□ 1.28
Col20a1Q923P0 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.04■■□□□ 1.28
Col20a1Q923P0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col20a1Q923P0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col20a1Q923P0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Gm12933-201ENSMUST00000120203 872 ntBASIC23.02■■□□□ 1.28
Col20a1Q923P0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col20a1Q923P0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col20a1Q923P0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col20a1Q923P0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Col20a1Q923P0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col20a1Q923P0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col20a1Q923P0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Col20a1Q923P0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Col20a1Q923P0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23■■□□□ 1.27
Col20a1Q923P0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col20a1Q923P0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23■■□□□ 1.27
Col20a1Q923P0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col20a1Q923P0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col20a1Q923P0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms