Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim60Q8VI40 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim60Q8VI40 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim60Q8VI40 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim60Q8VI40 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim60Q8VI40 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim60Q8VI40 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trim60Q8VI40 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim60Q8VI40 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim60Q8VI40 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Trim60Q8VI40 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.07■□□□□ 0.8
Trim60Q8VI40 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Gm9959-201ENSMUST00000068277 390 ntBASIC20.07■□□□□ 0.8
Trim60Q8VI40 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim60Q8VI40 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim60Q8VI40 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.05■□□□□ 0.8
Trim60Q8VI40 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim60Q8VI40 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim60Q8VI40 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim60Q8VI40 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim60Q8VI40 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim60Q8VI40 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim60Q8VI40 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim60Q8VI40 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim60Q8VI40 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim60Q8VI40 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim60Q8VI40 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Trim60Q8VI40 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.01■□□□□ 0.79
Trim60Q8VI40 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim60Q8VI40 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.01■□□□□ 0.79
Trim60Q8VI40 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim60Q8VI40 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trim60Q8VI40 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms