Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Gm13234-201ENSMUST00000120010 747 ntBASIC21.19■□□□□ 0.98
Upb1Q8VC97 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Reep4-203ENSMUST00000226563 1444 ntBASIC21.19■□□□□ 0.98
Upb1Q8VC97 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.18■□□□□ 0.98
Upb1Q8VC97 AV356131-201ENSMUST00000206201 750 ntBASIC21.18■□□□□ 0.98
Upb1Q8VC97 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upb1Q8VC97 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Gm27405-201ENSMUST00000184201 112 ntBASIC21.17■□□□□ 0.98
Upb1Q8VC97 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.17■□□□□ 0.98
Upb1Q8VC97 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.17■□□□□ 0.98
Upb1Q8VC97 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.17■□□□□ 0.98
Upb1Q8VC97 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Upb1Q8VC97 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Gm7291-201ENSMUST00000199147 382 ntBASIC21.16■□□□□ 0.98
Upb1Q8VC97 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upb1Q8VC97 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.15■□□□□ 0.98
Upb1Q8VC97 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upb1Q8VC97 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Upb1Q8VC97 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upb1Q8VC97 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upb1Q8VC97 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upb1Q8VC97 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Upb1Q8VC97 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.13■□□□□ 0.97
Upb1Q8VC97 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upb1Q8VC97 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Upb1Q8VC97 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upb1Q8VC97 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Upb1Q8VC97 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upb1Q8VC97 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 165.7 ms