Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
Cd109Q8R422 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cd109Q8R422 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cd109Q8R422 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cd109Q8R422 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
Cd109Q8R422 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Cd109Q8R422 Gm43859-201ENSMUST00000200075 1412 ntBASIC27.93■■■□□ 2.06
Cd109Q8R422 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cd109Q8R422 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Cd109Q8R422 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC27.93■■■□□ 2.06
Cd109Q8R422 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Cd109Q8R422 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Cd109Q8R422 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC27.92■■■□□ 2.06
Cd109Q8R422 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Cd109Q8R422 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
Cd109Q8R422 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Cd109Q8R422 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC27.91■■■□□ 2.06
Cd109Q8R422 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Cd109Q8R422 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Cd109Q8R422 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Cd109Q8R422 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC27.9■■■□□ 2.06
Cd109Q8R422 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
Cd109Q8R422 Gm7290-201ENSMUST00000104990 617 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Gm12918-201ENSMUST00000120234 636 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Gm7860-201ENSMUST00000121190 879 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Gm15710-201ENSMUST00000121821 636 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Gm5075-201ENSMUST00000196916 622 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC27.9■■■□□ 2.06
Cd109Q8R422 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cd109Q8R422 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Cd109Q8R422 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Cd109Q8R422 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC27.89■■■□□ 2.06
Cd109Q8R422 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Cd109Q8R422 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Cd109Q8R422 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Cd109Q8R422 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC27.89■■■□□ 2.05
Cd109Q8R422 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Cd109Q8R422 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Cd109Q8R422 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC27.88■■■□□ 2.05
Cd109Q8R422 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cd109Q8R422 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Cd109Q8R422 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Cd109Q8R422 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC27.87■■■□□ 2.05
Cd109Q8R422 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC27.87■■■□□ 2.05
Cd109Q8R422 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC27.87■■■□□ 2.05
Cd109Q8R422 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC27.86■■■□□ 2.05
Cd109Q8R422 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.86■■■□□ 2.05
Cd109Q8R422 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cd109Q8R422 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cd109Q8R422 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 Gm6211-202ENSMUST00000167849 925 ntBASIC27.85■■■□□ 2.05
Cd109Q8R422 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cd109Q8R422 Gm12527-201ENSMUST00000117967 564 ntBASIC27.84■■■□□ 2.05
Cd109Q8R422 Gm6365-201ENSMUST00000054711 744 ntBASIC27.84■■■□□ 2.05
Cd109Q8R422 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC27.84■■■□□ 2.05
Cd109Q8R422 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
Cd109Q8R422 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 Gm6802-201ENSMUST00000167843 1983 ntBASIC27.84■■■□□ 2.05
Cd109Q8R422 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC27.84■■■□□ 2.05
Cd109Q8R422 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Cd109Q8R422 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Cd109Q8R422 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Cd109Q8R422 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC27.83■■■□□ 2.05
Cd109Q8R422 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC27.83■■■□□ 2.05
Cd109Q8R422 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Cd109Q8R422 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cd109Q8R422 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Cd109Q8R422 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cd109Q8R422 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cd109Q8R422 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cd109Q8R422 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Cd109Q8R422 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Cd109Q8R422 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC27.8■■■□□ 2.04
Cd109Q8R422 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cd109Q8R422 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cd109Q8R422 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Cd109Q8R422 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Cd109Q8R422 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC27.79■■■□□ 2.04
Cd109Q8R422 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Cd109Q8R422 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC27.79■■■□□ 2.04
Cd109Q8R422 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Cd109Q8R422 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Cd109Q8R422 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Cd109Q8R422 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
Cd109Q8R422 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cd109Q8R422 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms