Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim4Q8C1Q6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim4Q8C1Q6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smim4Q8C1Q6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim4Q8C1Q6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim4Q8C1Q6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim4Q8C1Q6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim4Q8C1Q6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim4Q8C1Q6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Rps24-207ENSMUST00000224568 714 ntBASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim4Q8C1Q6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms