Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
R3hdm4Q4VBF2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
R3hdm4Q4VBF2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
R3hdm4Q4VBF2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3hdm4Q4VBF2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
R3hdm4Q4VBF2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Golph3-202ENSMUST00000226517 2359 ntBASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3hdm4Q4VBF2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
R3hdm4Q4VBF2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
R3hdm4Q4VBF2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
R3hdm4Q4VBF2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
R3hdm4Q4VBF2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3hdm4Q4VBF2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms